Neglected wild rice (Oryza spp.) in Sri Lanka
Abstract:
In Sri Lanka, five wild rice species are reported; Oryza nivara [AA], O. rufipogan (AA) O. eichengeri [CC], O. rhizomatis (CC) and O. granulate (GG). Wild rice is the presumed progenitor/s of cultivated rice and is distributed in tropical wetland ecosystems of the world. Wild rice specie often thrives and evolve in wetlands are now neglected. Out of the total of five wild rice species, three are commonly grown in wetlands. The present review describes five wild rice species individually and their treats have also been documented. Wild rice species in the wetlands of Sri Lanka indicates a decreasing trend. Several factors contribute to the decrease in wild rice communities. Degradation of habitat due to the environmental pollution, national developmental projects, agricultural activities and climatic change associated drought and floods stands as dominant factors. Building awareness among the communities living associated with the wetlands is one of the important activities to reduce further deterioration of the reduction of the wild rice species in Sri Lanka. Restoration of wild rice communities introducing community participatory programmes with relevant authorities are recommended.
Although five wild rice species are reported, the precise number of wild rice species in Sri Lanka becomes uncertain and thus, need to assess Oryza species complexes in Sri Lanka using morphological, anatomical, and molecular characterization information to enumerate number of species within each Oryza complex and of species and species complexes. Characterization of wild rice species was attempted through agro-morphological, anatomical and molecular characterizations. O. rhizomatis and O. eichingeri (CC) are well separated from the rest of the wild rice species (AA). Molecular data revealed, O. nivara and O. rufipogon have undergone independent evolution within Sri Lanka. Well separated five wild rice species are present in Sri Lanka. The findings led to conclude that wild rice species in Sri Lanka are “ecological swarms” and represents allopatric or sympatric populations. A comprehensive knowledge on genetic diversity and population structure of wild rice germplasm in Sri Lanka is useful to incorporate them in rice breeding programs.
KeyWords:
Oryza species, Wild rice, Wetlands, Sri Lanka
References:
- Aggarwal, R., Brar, D., Khush, G. (1997). Two new genomes in the Oryza complex identified on the basis of molecular divergence analysis using total genomic NA hybridization. Mol. Gen. Genet. 1997;254:1–12. https://link.springer.com/article/10.1007/s004380050384.
- Biswal, J., Sharma, S.D. (1987). Taxonomy and phylogeny of Oryza collina. Oryza.1987;24:24-29. https://agris.fao.org/agris-search/search.do?recordID=IN8800340.
- Bor, N. L.(1960). Grasses of Burma, Ceylon, India and Pakistan. Pergamon Press, London; 1960.
https://www.cabi.org/isc/abstract/19611602837
- Brar, D., Khush, G. (1997). Wide hybridization for rice improvements: alien gene transfer and molecular characterization of introgression. In: Jones, M.P., Dingkhun, M., Johnson, D.E., Fagade, S.O. (Eds.), Interspecific Hybridization: Progress and Prospect. WARDA, Cote divoire, pp. 21–29.
- Chang, T. T. (1976). The origin, evolution, cultivation, dissemination, and diversification of Asian and African rices. Euphytica 1976;25:425–441. https://link.springer.com/article/10.1007/BF00041576.
- Dally, A.M., Second, G. (1990). Chloroplast DNA diversity in wild and cultivated species of rice (genus Oryza, section Oryza): cladistic-mutation and genetic-distance analysis. Theor. Appl. Genet. 80:209-222.
- Ghesquiere A. 1987. Evolution of Oryzalongistaminata. ORSTOM, Paris, France.
- Ge, S., Sang, T., Lu, B .R., Hong, D.Y. (1999). Phylogeny of rice genomes with emphasis on origins of allotetraploid species. Proc Natl Acad Sci USA. 1999;96:14400–14405. DOI:10.1073/pnas.96.25.14400.
- Harriman, N.A. (1994). Oryza. In: Flora of Ceylon, Vol. VIII, pp: 326-330., M.D. Dasanayake and W.R. Clayton (Eds). Amerind Publishing Co. Pvt., Ltd., New Delhi, India.
- Jena, K. K., Khush, G. S. (1990). Introgression of genes from Oryzaofficinalis Well ext Watt. to cultivated rice, O. sativa L. Theoretical and Applied Genetics 80:737–745.
- Khush GS 1997. Origin, dispersal, cultivation, and variation of rice. Plant Mol. Biol. 35: 25-34.
- Morishima, H., Sano, Y., Oka, H.I. (1992). Evolutionary studies in cultivated rice and its wild relatives. Oxford Surveys in Evolutionary Biology. 1992; 8:135-184.
- Nayar, N. M. (1973). Origin and cytogenetics of rice. Advances in Genetics. 1973;17:153–292. DOI: https://doi.org/10.1016/S0065-2660(08)60172-8.
- Oka, H. I. (1988). Origin of cultivated rice. Japan Sci. Soc. Press/Elsevier, Tokyo/Amsterdam; 1988. ISBN 0444989196.
- Piegu, B., Guyot, R., Picault, N., Roulin A. et al., (2006). Doubling genome sizewithoutpolyploidization: dynamics of retrotransposition-drivengenomic expansions in Oryzaaustraliensis, a wild relative of rice. Genome Res.16:1262–1269.
- Provan, J., Corbett ,G., McNicol, J.W., Powell, W. (1997). Chloroplast DNA variability in wild and cultivated rice (Oryza sativa) revealed by polymorphic chloroplast simple sequence repeats. Genome. 1997; 40:104–110. DOI: https://doi.org/10.1139/g97-014.
- PGRC. Characterization Catalogue of Rice (Oryza sativa). Department of Agriculture., Ministry of Agriculture and Lands, Sri Lanka; 1999.
- Sharma, S. D., Shastry, S,V,S. (1965). Taxonomic studies in genus Oryza L. III. O. rufipogon Griff.. sensustricto and O. nivara Sharma et Shastry nom. Nov. Indian Journal of Genetics and Plant Breeding. 1965;25:157–167.
- Sitch, L. A., Dalmacio, R. D., Khush, G. S. (1989). Crossability of wild Oryza species and their potential use for improvement of cultivated rice. Rice Genet. Newsl. 1989;6:58– 59.
https://shigen.nig.ac.jp/rice/oryzabase/asset/rgn/vol6/v6p58.html
- Somaratne S, Weerakoon S. R , Siriwardana K.G.D.I. (2018). Oryza rhizomatis Vaughan. In. Mondal TK, Henry RI, editors. The Wild Oryza Genomes, Compendium of Plant Genomes. Springer International Publishing AG; 2018. P. 263-269. DOI:10.1007/978-3-319-71997-9_23
- Tateoka, T. (1962).Taxonomic studies of Oryza II. Several species Complex. Bot. Mag. Tokyo. 1962;75:455-461.www.jstage.jst.go.jp › article › jplantres1887 › _pdf.
- Tateoka, T. (1963). Taxonomic studies of Oryza III. Key to the species and their enumeration. Bot Mag Tokyo 76:165-173.
- Tateoka, T. (1964). Notes of some grasses. XVI. Embryo structure of the genus Oryza in relation to their systematics. Am J Bot. 1964; 51:539-543. DOI:10.1002/j.1537-2197.1964.tb06667.x
- Vaughan, D.A., (1989). The genus Oryza L. status of taxonomy. IRRI Res. Pap. Ser. 138.
- Vaughan, D. A. (1990). A new rhizomatous Oryza species (Poaceae) from Sri Lanka. Botanical Journal of the Linnean Society. 1990;103:159-163.https://doi.org/10.1111/j.1095-8339.1990.tb00182.x
- Vaughan, D.A., Morishima, M. (2002). Biosystematics of the genus Oryza. In: Smith CW, Dilday RH, editors. Rice: Origin, History, Technology, and Production. Wiley Series in Crop Science, John Wiley & Sons, Inc., New Jersey; 2002. p.27–65.
- Wang, X.K., Cai, H.W., Cheng, K.S. (1992). The discovery of an Est locus related to the origin, evolution and classification of Asian rice. Chinese Rice Res. Newslt. 1992;7:1-2. www.ricescience.org › abstract › abstract9333.
- Weerakoon, S. R. (2021). Characterization of Wild Rice - Oryza Species Complexes in Sri Lanka. In. Aakash Kumar Goyal). Cereal Grains Vol. 2. IntechOpen 2021. P. 1 – 18. DOI: 10.5772/intechopen.97244.